PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39969.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 138aa    MW: 15872.9 Da    PI: 5.0705
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.21.5e-13371151098
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 + ++    +p  f++  +g+  e ++  +  +++++W +kl  + k+    ++kGW +F+++n+++ gD++vF++dg++ef   v +++
  PHT39969.1  37 NDSLEKRKIPVGFLKYLKGQ--EYIEHAILKRDSKRWLIKL--NDKR----FEKGWGKFAEQNDVQLGDMLVFRHDGNMEF--DVCIID 115
                 445556699*****555777..5668899999*********..7777....9************************99999..777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MNALMEYKDT DIIAPKAASV KTSEEGTDSV GNLNAENDSL EKRKIPVGFL KYLKGQEYIE  60
HAILKRDSKR WLIKLNDKRF EKGWGKFAEQ NDVQLGDMLV FRHDGNMEFD VCIIDSTHCD  120
REYAEYLHEE RGGGLIQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-13B3 family protein