PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39970.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 137aa    MW: 15442.8 Da    PI: 9.2849
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39970.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.98.5e-1429110488
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                  +++++ l+ + l+lp +f+++ g+ + ++ +++l+ e  r W+v +   k++ ++ +  GW +F  +ngL++gD+  F+l+++ 
  PHT39970.1  29 STVKPYCLRCAALYLPTDFVKSSGLMN-RNCEMILKGEAQRCWSVWF--GKSGHHFGIIHGWGKFRAENGLQVGDVYKFELIKNG 110
                 567899999999********9997774.5569***************..9999999999*********************99863 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MQKPSNMSVL NAQVATSTSG DDDYPCFVST VKPYCLRCAA LYLPTDFVKS SGLMNRNCEM  60
ILKGEAQRCW SVWFGKSGHH FGIIHGWGKF RAENGLQVGD VYKFELIKNG EVPIAQFHCK  120
YSGKVAKREE RRSKLNT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127134KREERRSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24680.13e-16B3 family protein