PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39982.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 204aa    MW: 24100.8 Da    PI: 6.5803
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.11.1e-1117911094
                HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3 10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                 +k+g l +p  f+ ++ +   + + +  +  + g++W vk+   +++++    ++W+eFv++++L+ gD+++F+++g+++f   v
  PHT39982.1 17 GFKNG-LKIPIGFL-KYlK--RHDQYEHAIIRRVGKKWLVKV---NGPQS--EDGNWNEFVEEHDLQLGDMLIFQHEGDMKF--DV 91
                56665.99*****9.7732..335567888899*********...55555..699*********************999888..55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MKVSPKKPQL FKQILPGFKN GLKIPIGFLK YLKRHDQYEH AIIRRVGKKW LVKVNGPQSE  60
DGNWNEFVEE HDLQLGDMLI FQHEGDMKFD VSSFDLSHCN KEYEEYFHED EDEEADEKKD  120
EEVATRDKPF GQSHFECILA NIAFRKVSFM GHLKLISCKT IQEYNLLTLQ LKLSNLFHTI  180
CLCLHTKIFM IEFHFPPKND FVFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31650.11e-18B3 family protein