PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39986.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 140aa    MW: 16260.4 Da    PI: 8.6311
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.35.9e-1847130693
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 ++++ l ++ l+lpk+fa+e+g+++++  +l++ de+ rsW++kl  + +  ++++++ W e +++n+LkegD + F+++  +++++ 
  PHT39986.1  47 VRPYCLLKNHLYLPKRFARENGLINKK-CDLVISDERQRSWNLKL--NTYNHGVYIGEEWHELCDDNDLKEGDRIKFEVVT-NGEKPI 130
                 5677777888***********988654.59***************..999999*************************876.444455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MLHKRSLGSD RDADKPNPNV VSTRKAFPKE ESATDSSFGQ SHFVCIVRPY CLLKNHLYLP  60
KRFARENGLI NKKCDLVISD ERQRSWNLKL NTYNHGVYIG EEWHELCDDN DLKEGDRIKF  120
EVVTNGEKPI WKFHGKSSLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31630.15e-16B3 family protein