PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39989.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 307aa    MW: 33307 Da    PI: 10.4513
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.42e-30217275259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+++WrKYGqK++kgs++pr+YYrC+s  gCp++k+ver+++dp+++++tYe++H+h+
  PHT39989.1 217 ADEFTWRKYGQKPIKGSPYPRGYYRCSSLkGCPARKHVERATDDPRMLIVTYENDHEHH 275
                 69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MALDLFAIEQ TASAGLKSMD HLIQFVSSNP TAKPDCREIT EYTVSNFRNV ISMLNRPTGH  60
ARVRRGGPVQ PVKVAPRVVS SPVVAPPMVA SPVEKEKEKE KMFRSTPALT FDFTKRKVAV  120
PAAPSPAAGV GVVSKDVAMA NSTNSSSSFV STITAEGSVS NGRPPIAGKR CRDHDVSDEF  180
SGRTSSAGKC PCKKSKPKVK KVIRVPAISS KTSDIPADEF TWRKYGQKPI KGSPYPRGYY  240
RCSSLKGCPA RKHVERATDD PRMLIVTYEN DHEHHHNIQT AFSGAAIGSR DGSSGQRMMV  300
FESMGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.26e-67WRKY family protein