PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40006.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 353aa MW: 39930.9 Da PI: 9.1513

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.7	6.4e-55	11	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePwdLp k+k e kewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ PHT40006.1 11 LPPGFRFHPTDEELITYYLVNKINDANFTG-RAIADVDLNKSEPWDLPGKAKMEGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIMDSknnt 108 79***********************999.89***********9999999***********************************97766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++el+g+kktLvfykgrap+gekt+Wvmheyr+ PHT40006.1 109 NSELIGMKKTLVFYKGRAPRGEKTNWVMHEYRI 141 6777*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MEEVMKEETQ LPPGFRFHPT DEELITYYLV NKINDANFTG RAIADVDLNK SEPWDLPGKA 60 KMEGKEWYFF SLRDRKYPTG VRTNRATNTG YWKTTGKDKE IMDSKNNTNS ELIGMKKTLV 120 FYKGRAPRGE KTNWVMHEYR IRSKSSYRTN KQDEWVVCRI FQKSVGLKKC PININHSRAT 180 VSPYSLSINQ NAPMSSQMIL QLPHDHQGFQ FAMGRSNNNY MNNHGDQIQD VNNRVIFQSG 240 PSNLNNFPQP QMSTYNVGGG STSGGGRGEG DNNYFSISRL NLNLGGRTGA SSQPILRPMP 300 PPPPPPPIMS QQELASSMMT NCYGGEMNNA NTMNSGVMSM DHCADLENYW ATY

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MEEVMKEETQ LPPGFRFHPT DEELITYYLV NKINDANFTG RAIADVDLNK SEPWDLPGKA  60
KMEGKEWYFF SLRDRKYPTG VRTNRATNTG YWKTTGKDKE IMDSKNNTNS ELIGMKKTLV  120
FYKGRAPRGE KTNWVMHEYR IRSKSSYRTN KQDEWVVCRI FQKSVGLKKC PININHSRAT  180
VSPYSLSINQ NAPMSSQMIL QLPHDHQGFQ FAMGRSNNNY MNNHGDQIQD VNNRVIFQSG  240
PSNLNNFPQP QMSTYNVGGG STSGGGRGEG DNNYFSISRL NLNLGGRTGA SSQPILRPMP  300
PPPPPPPIMS QQELASSMMT NCYGGEMNNA NTMNSGVMSM DHCADLENYW ATY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-106	NAC family protein