PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40013.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bZIP

Protein Properties

Length: 350aa MW: 38672.4 Da PI: 5.3779

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.1	6.8e-17	176	231	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr ++NRe+ArrsR+RK+a ++ Le+ v+++ +eN++L k+l +++++ PHT40013.1 176 DIKRIRRQASNRESARRSRRRKQAHMADLENQVDQFRGENESLFKQLADATQQYKD 231 58******************************************888877777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEKKMANFAS RNMKKSPSIL AMEEIYGQDA KISDGFGASD HHQQQSTNNN NNINHHDENN 60 NNNNNGHHHA QLFGDICSID PSFTMRNQDI LNGFSNCGMT ERPLWSPNIT PKQSTISVTV 120 DSQSSICAGS PTPTIIMPPK ARDNQTMGAN SGSYQSDDDD VDGEVGPCEQ STDPLDIKRI 180 RRQASNRESA RRSRRRKQAH MADLENQVDQ FRGENESLFK QLADATQQYK DALTNNRVLK 240 SDVEALRAKV KLAEDMVARG SLTSSLSHLL QNYLNTPQSL GTTTTTNNNN TMCRLDNVSP 300 TITVPGEDSW GVISSQNSMI GVDNNNVNAF NQNGAMSDTV SCVSDVWSWE

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEKKMANFAS RNMKKSPSIL AMEEIYGQDA KISDGFGASD HHQQQSTNNN NNINHHDENN  60
NNNNNGHHHA QLFGDICSID PSFTMRNQDI LNGFSNCGMT ERPLWSPNIT PKQSTISVTV  120
DSQSSICAGS PTPTIIMPPK ARDNQTMGAN SGSYQSDDDD VDGEVGPCEQ STDPLDIKRI  180
RRQASNRESA RRSRRRKQAH MADLENQVDQ FRGENESLFK QLADATQQYK DALTNNRVLK  240
SDVEALRAKV KLAEDMVARG SLTSSLSHLL QNYLNTPQSL GTTTTTNNNN TMCRLDNVSP  300
TITVPGEDSW GVISSQNSMI GVDNNNVNAF NQNGAMSDTV SCVSDVWSWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	198	RRSRRRKQ
2	193	198	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-48	bZIP family protein