PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT40017.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 296aa MW: 33977.3 Da PI: 10.0366

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT40017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.7	2.9e-15	11	94	2	99
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 fk ++k+g + +p f ++ +g++ ++ + + g++W+vk+ +++ +l++GW +Fv++++L+ gD ++F+++g +ef v+vf++ PHT40017.1 11 FKPI--LPNFKHG-IKIPIAFS-KYlKGIN---QEHAILRRAGKKWRVKV--NRR----LLGEGWAKFVEEHDLQLGDLLIFRHEGAMEF--EVSVFDS 94 5555..5677777.99***8.6655553...35677789*****..666....6*********************9999999..9999886 PP
2	B3	41.5	2.4e-13	157	243	5	96
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++++ l+++ l lp +fa++ g+ +++ ++t++d + rsW++ l ++ ++++++ W++F+ an LkegD ++++ + +++++ +++ PHT40017.1 157 TITPYCLSRDHLQLPAPFARDSGLANRK-CMITIRD-ELRSWKLVL--YSSGAHTYISSTWRKFCIANCLKEGDQIMLEIVA-NGKNPILRF 243 468999************99988655.4888888.78***..8888889**********************876.555566655 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKIAPNKPHF FKPILPNFKH GIKIPIAFSK YLKGINQEHA ILRRAGKKWR VKVNRRLLGE 60 GWAKFVEEHD LQLGDLLIFR HEGAMEFEVS VFDSNQFERK YKQIPKGVNE AGEEIDHNCK 120 FTSQEKSKLD IKSPHKVFPK VEAEENMPLG RPHFIYTITP YCLSRDHLQL PAPFARDSGL 180 ANRKCMITIR DELRSWKLVL YSSGAHTYIS STWRKFCIAN CLKEGDQIML EIVANGKNPI 240 LRFYGKENSS LQSEEKKPNL DAKRISSGRK EANVLASTSA NADSQFFTII MPYAVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26680.1	6e-36	B3 family protein