PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40023.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 102aa    MW: 11565.4 Da    PI: 10.0544
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.7e-091256147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+ T+ E+ l + + +++G+  Wk+I + ++ gRt+k +  +w  +
       PHT40023.1 12 KGSLTPNEQNLVISLQAKYGNT-WKKIVAQVP-GRTAKRLGKWWEVF 56
                     67789***************99.*********.*****999999776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MSAISKKLLI KKGSLTPNEQ NLVISLQAKY GNTWKKIVAQ VPGRTAKRLG KWWEVFKEKQ  60
LKQHQDYVES PEIFAIFGGG GSPEGVVSDK YDHILEIFAE KY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.12e-23MYB family protein