PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40035.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 290aa    MW: 33070.6 Da    PI: 10.2768
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.46.1e-1412831799
                E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 +p  f ++ +g++   ++  +  + g+ W vk+  +++    +l++GW +Fv++++L+ gD+++F+++g +ef   v+vf++
  PHT40035.1 12 KIPIAFSKHLKGIN---QERAILRRAGKNWCVKV--NGR----LLGEGWAKFVEEHDLQLGDVLIFRHEGAMEF--EVSVFDS 83
                68999985555553...24466688*********..555....6***********************9999999..9999886 PP
2B352.58.9e-17160240588
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                  +++++  + +l+lp  fa+ +g+   + ++++l+de+grsW+v+l     + r+ +tkGW++F +an +++gD+  F+l+++ +
  PHT40035.1 160 IIKPYSVIRPLLYLPMAFARPNGLM--RRTKMILRDEKGRSWSVQL--GPLGPRFGITKGWRQFREANAVQVGDTYKFELIDNgM 240
                 44566666678***********988..5569***************..99999**************************998644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MRNQIQDIDE KKIPIAFSKH LKGINQERAI LRRAGKNWCV KVNGRLLGEG WAKFVEEHDL  60
QLGDVLIFRH EGAMEFEVSV FDSNQFERKY EHTAEGVNEA GEEINHTFKK FTSQDLRANA  120
SLHPEGKKPN LDAKRVSSRR KETNVLASTS ANADGHFVTI IKPYSVIRPL LYLPMAFARP  180
NGLMRRTKMI LRDEKGRSWS VQLGPLGPRF GITKGWRQFR EANAVQVGDT YKFELIDNGM  240
IPVAYFRILK QDLRENASFH PEEKKSKSNA NANHQFVSTI NPYSSASLTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.12e-28B3 family protein