PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40269.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 252aa    MW: 28702.1 Da    PI: 6.5134
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-172271255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +g+WvAeI+  +   ++ r +lg+f++aeeAa+a+++a+  l+g
  PHT40269.1 22 KFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDSAEEAARAYDEAACLLRG 71
                799******.7******99932...36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEQEQVHGST KQWNPKVQKQ RKFVGVRQRP SGKWVAEIKN TTQKIRMWLG TFDSAEEAAR  60
AYDEAACLLR GSNARTNFLN HAPVSPALSM KIRNLLNQKK SLNKMINPKS THKNPTTRTT  120
TTTTISTVST SASRHQESKI FDDDAYKPDM SCFMTGIDQM GSSNFDHSTT FSTDFDSILL  180
GDEQVGNFDH EVPKGNNLED QMPEFEQMKV ERQISASLYA VNGVNEYWES FQDCNDATFW  240
DLPMLYQMFC PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-40ERF family protein