PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40562.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 180aa    MW: 20704.5 Da    PI: 8.0655
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.42.5e-1429835128
         NAM  35 kevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                 +evd+y   ePw++  +   +++  y  ++ +kk+a + r++r++ +g W+ + k k+v++++g+l+g+ k+L +     ++++ k+   +W+m ey+l
  PHT40562.1   2 QEVDLYGDkEPWQIF-E-GDNTNTHYCITQLKKKKADSIRTERSVGKGKWNPQSKAKQVFDHNGRLMGCVKSLKYIprtaHKSSIKAAYGEWLMTEYSL 98 
                 7889886449****5.2.234456799999999999****************************************765445555667889******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MQEVDLYGDK EPWQIFEGDN TNTHYCITQL KKKKADSIRT ERSVGKGKWN PQSKAKQVFD  60
HNGRLMGCVK SLKYIPRTAH KSSIKAAYGE WLMTEYSLRY SYLNDIKKKG YVICKIKKKK  120
ENDSDKHKGV ANDDQNMSDI EEYIDSILKE EDLNHDLAVN SKHELALAGS IDLDAIDFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.11e-06NAC family protein