PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40656.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 256aa    MW: 28387.7 Da    PI: 9.7514
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.11.1e-31170224358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p+YVNaKQy++IlkRRq Rakle+++kl  k rkpylh+SRh+hA+ R+RgsgGrF
  PHT40656.1 170 PIYVNAKQYNAILKRRQVRAKLEAQNKL-VKDRKPYLHDSRHRHAMERARGSGGRF 224
                 9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MLSFSKKGCP GKESQSFTPL FVSCSSMWNS SEKSALKHHS DIKKSESQFQ DLDSTSTLST  60
GQSNHVEAAM GKSNTVLQNV AAHPGWGGIY DLQEETGTNA SLSGESDTNT LPQLQVHHNY  120
PAACVSYPWA DSYFGRLIAT YESNAINYPQ RAGVTSTRVA LPLDCTESLP IYVNAKQYNA  180
ILKRRQVRAK LEAQNKLVKD RKPYLHDSRH RHAMERARGS GGRFLNTKNM QQSNPSSPKH  240
DKNIFKQQAG AMVQHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.23e-39NF-YA family protein