PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40760.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 231aa    MW: 26094.7 Da    PI: 9.3719
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30104163159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++DgynWrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs +dp+v++ tYegeHnh+
  PHT40760.1 104 VKDGYNWRKYGQKVTRDNPSPRAYYKCSFApTCPVKKKVQRSVKDPSVLVATYEGEHNHP 163
                 58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MLEEELKRMK EENKKLATML TTLCENYNSL RTHLIELQQK HSTHEEDNNS KLLSRKRKAE  60
DVCCVNNSDI NFEEASPKRP REIITTSIST VSVKTTLSDQ TSLVKDGYNW RKYGQKVTRD  120
NPSPRAYYKC SFAPTCPVKK KVQRSVKDPS VLVATYEGEH NHPHPSQAET TVPLVNQGVI  180
TNPTFFNKFM EDINTSSLQK DLVAKMVPSL SKNPSFAATV ATAISGIFSR I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-52WRKY family protein