PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40882.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 265aa    MW: 30702.2 Da    PI: 5.337
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-2075125155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp +   ++r++lg+f taeeAa  +++a+ k++g
  PHT40882.1  75 KKFRGVRQRP-WGKWAAEIRDPMK---KTRIWLGTFETAEEAAMVYDQAAIKIRG 125
                 59********.**********843...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MCLWSPIFVL LIDEALSYKS CKINSSDEEE ENRVKKYVTE IRFEKRVSSV DLKKSSSSSN  60
KKKKMMDVKK DENVKKFRGV RQRPWGKWAA EIRDPMKKTR IWLGTFETAE EAAMVYDQAA  120
IKIRGPDALT NFIKPPPKKD SMVTSVSGYD STGESENLSS PTSVLRHNNV GVADAKSVKE  180
QMDERKRLEI VMQNEIMLDD NLPLMDQCFL KDFFDFRSPS PLMDDVLLPV FCDKMNLLPE  240
LSYDRKLDED LESCKWVNDF FENYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.15e-37ERF family protein