PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40897.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 89aa    MW: 10936.4 Da    PI: 9.6578
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.32e-093372445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++++E++l+++ +k+ G + W +Ia +++ gRt++++  +w 
       PHT40897.1 33 MSKQEEDLIYRMHKLVGDR-WGLIAGRIP-GRTAEEIERFWI 72
                     689**************99.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MDQNLHYHQT KLTHRCRNRE EEVNSTEWEF ISMSKQEEDL IYRMHKLVGD RWGLIAGRIP  60
GRTAEEIERF WIMRHSDGYA HKRRQLRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.13e-34MYB_related family protein