PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT40976.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 345aa    MW: 37806.7 Da    PI: 9.7553
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT40976.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.52.7e-1645129186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  v +L+ea++ ++   +r+klk+++We+v+k++     +++  ++++qCk+k+e+++kry+ + +++ +      s++p++ +l+
  PHT40976.1  45 EWSEGAVSCLLEAYEAKWILRNRAKLKGQDWEDVAKHVsaraNSTKSPKTQTQCKNKIESMKKRYRSESATAADA-----SSWPLYPRLD 129
                 5*************************************87777777888999******************99984.....57****9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MDKQAGNHHH QNHEISNKDD YSPKIKPQNY QVATGNNSDR LKRDEWSEGA VSCLLEAYEA  60
KWILRNRAKL KGQDWEDVAK HVSARANSTK SPKTQTQCKN KIESMKKRYR SESATAADAS  120
SWPLYPRLDL LLRGNNASAA SFSLIPAPAA VAPPLNCVVD VVEPPQAAIV MPPPPEAPPT  180
SLPPLPPPPP PTALPIGNGD QNSHGSNGLD RGIKEDIMDA KLSDNAAAPD HKNATATNSS  240
STPALYSDNK SKSKLRSKKR KRAVEGWEIG ESIRLLAEVV VRSEQARMET MRDIERMRAE  300
AEAKRGEMDL KRTEIIANTQ LEIAKLFASI TKGSVDSSLR IGRSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.13e-95Trihelix family protein