PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41009.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 862aa MW: 97262.3 Da PI: 6.7595

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.7	6.7e-17	65	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +f+++YA +vGFs+ + + ++ k ng i++ +f Cs+e +r+++ ++ C+a+l+++k++++ w+vtk++++HnH+++ PHT41009.1 65 NFFEAYAMRVGFSIHVGQFSRAKPNGPIITWDFSCSREVFRSRNIES--------------CNAMLRIEKKSSDSWVVTKFVEDHNHSMV 140 69**************************************99877..............************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 862 aa Download sequence
MNSEVTDIVG QKRQKSGERV SEPNQNPKQG LPDNLAERDS IIEVDDGEEK PYVGMEFQTE 60 EAAKNFFEAY AMRVGFSIHV GQFSRAKPNG PIITWDFSCS REVFRSRNIE SCNAMLRIEK 120 KSSDSWVVTK FVEDHNHSMV NPRKVNYLRP RKHVAGASKT VGEVPGAPTV VMVPPVVIPV 180 DGNHVFVSSN EGVKDASAVE PNRVTKSFSP VIPLMFIQPC SRKRTLGRDA HNLLDYFKKM 240 QAENPGFYYA IQLDDENRMT NAFWADARSR ISYRHFGDAV IFDTMYRPNL FQVPFAPFTG 300 VNHHGQMVLF GCGLLLDESE SSFTWLFQTW LSAMNNRPPV SITTDQDRAI KTAVNVVLPS 360 TRHCICKWHI LREGQERLAH VYMAHPSFYG ELYSCINYSE TIEDFESSWV SVLDKYNLGK 420 NEWLQAVYNA RDQWAPVYFR DSFFAALPSN QGVTSFFDGY VNQQTTLPMF FKQYERALES 480 SLEREIASDF DTNCTTPMLR TPSPMEQQAA NLFTKIVFAK FQEELVETFA HTANKIDGDE 540 TRSKFRVAKY EQDDKAYIVM LNLAEMKASC SCQMFEYSGI LCRHILTVFT VTNVLKVPSH 600 YILKRWTRNA KVGQGSDEED IVKQGINSLT PRFNHLCVEA LRYAEEGAVS VETYDAAVSA 660 LRDGLRKIAI VVKNVSRPLT SRGSGSTQDE SIKSTPATSD TAPSLWTWQD AMPHHFNLND 720 GGLTAGDLNQ PTMTPVAINH DGGLADNVVV CTCFKSMTWV IENKSQASKV AVINLKLQDY 780 GKNPAGETEV QFRLTRVTLE PMLKSMAYIS QQLSLPANRV AVINLKLQDT KTPSGETEVK 840 FQVSRDTLGS MLRSMAYIRE QL

Sequence ? help Back to Top

Protein Sequence Length: 862 aa Download sequence

MNSEVTDIVG QKRQKSGERV SEPNQNPKQG LPDNLAERDS IIEVDDGEEK PYVGMEFQTE  60
EAAKNFFEAY AMRVGFSIHV GQFSRAKPNG PIITWDFSCS REVFRSRNIE SCNAMLRIEK  120
KSSDSWVVTK FVEDHNHSMV NPRKVNYLRP RKHVAGASKT VGEVPGAPTV VMVPPVVIPV  180
DGNHVFVSSN EGVKDASAVE PNRVTKSFSP VIPLMFIQPC SRKRTLGRDA HNLLDYFKKM  240
QAENPGFYYA IQLDDENRMT NAFWADARSR ISYRHFGDAV IFDTMYRPNL FQVPFAPFTG  300
VNHHGQMVLF GCGLLLDESE SSFTWLFQTW LSAMNNRPPV SITTDQDRAI KTAVNVVLPS  360
TRHCICKWHI LREGQERLAH VYMAHPSFYG ELYSCINYSE TIEDFESSWV SVLDKYNLGK  420
NEWLQAVYNA RDQWAPVYFR DSFFAALPSN QGVTSFFDGY VNQQTTLPMF FKQYERALES  480
SLEREIASDF DTNCTTPMLR TPSPMEQQAA NLFTKIVFAK FQEELVETFA HTANKIDGDE  540
TRSKFRVAKY EQDDKAYIVM LNLAEMKASC SCQMFEYSGI LCRHILTVFT VTNVLKVPSH  600
YILKRWTRNA KVGQGSDEED IVKQGINSLT PRFNHLCVEA LRYAEEGAVS VETYDAAVSA  660
LRDGLRKIAI VVKNVSRPLT SRGSGSTQDE SIKSTPATSD TAPSLWTWQD AMPHHFNLND  720
GGLTAGDLNQ PTMTPVAINH DGGLADNVVV CTCFKSMTWV IENKSQASKV AVINLKLQDY  780
GKNPAGETEV QFRLTRVTLE PMLKSMAYIS QQLSLPANRV AVINLKLQDT KTPSGETEVK  840
FQVSRDTLGS MLRSMAYIRE QL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein