PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41039.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 165aa    MW: 18686.2 Da    PI: 11.1676
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA97.41.5e-302074358
   CBFB_NFYA  3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                p+YVNaKQy++IlkRRq Rak ++++kl  k+rkpylheSRh+hA++R RgsgGrF
  PHT41039.1 20 PIYVNAKQYSAILKRRQVRAKRQAQNKL-VKNRKPYLHESRHRHAMKRDRGSGGRF 74
                9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MVGVTSTRVA LPLECTKILP IYVNAKQYSA ILKRRQVRAK RQAQNKLVKN RKPYLHESRH  60
RHAMKRDRGS GGRFLNTKNM QQSKPSSPKH DRNIFNRQAG GNISSYMVQH SQSGSWGTST  120
QSGSDVTSIF NGDDMFQQPE FRVSGFPFHM GATMQEAEDF MHVGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15968RHRHAMKRDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.22e-32NF-YA family protein