PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41082.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bZIP

Protein Properties

Length: 446aa MW: 48014 Da PI: 7.03

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.9	3.5e-16	241	296	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l +++++ + PHT41082.1 241 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNE 296 689*****************************************999999998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MDRVFSVDDD IGDHFWSTPP STAELGVDSP TSAAANSYSK MMNRSSSEWA FQRFLQEATA 60 ASPPQPPTMA SSSSSSHQND VVEIKDESLS SAANRNSSTA LNLKPATSFV SGPPQNIPVD 120 SEEYQAFLKN RLDLACAAVA LSRAKNLKPQ NSSSTAPDKG SETAGASQSV SHIGIKGSGQ 180 ELTNIQDKDS GGPVGIPSLP PVQKKPGVQV KSTTSGSSRD QSDDDEAEGE AETTQGTDPA 240 DVKRVRRMLS NRESARRSRR RKQAHLTELE TQVSQLRVEN SSLLKRLTDI SQKYNESAVD 300 NRVLKADVET LRAKVKMAEE TVKRVTGLQP LFQAMSDVTS MAMPSFSGSP SDTSADAAVP 360 VSNDPKHHYY QQPPNNHMPT HDPRIQNGMV DVPPIGNVQQ NPVTSSVGGN KMGRTSSMQR 420 VASLEHLQKR IRGEVSSCGT QGRGEQ

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MDRVFSVDDD IGDHFWSTPP STAELGVDSP TSAAANSYSK MMNRSSSEWA FQRFLQEATA  60
ASPPQPPTMA SSSSSSHQND VVEIKDESLS SAANRNSSTA LNLKPATSFV SGPPQNIPVD  120
SEEYQAFLKN RLDLACAAVA LSRAKNLKPQ NSSSTAPDKG SETAGASQSV SHIGIKGSGQ  180
ELTNIQDKDS GGPVGIPSLP PVQKKPGVQV KSTTSGSSRD QSDDDEAEGE AETTQGTDPA  240
DVKRVRRMLS NRESARRSRR RKQAHLTELE TQVSQLRVEN SSLLKRLTDI SQKYNESAVD  300
NRVLKADVET LRAKVKMAEE TVKRVTGLQP LFQAMSDVTS MAMPSFSGSP SDTSADAAVP  360
VSNDPKHHYY QQPPNNHMPT HDPRIQNGMV DVPPIGNVQQ NPVTSSVGGN KMGRTSSMQR  420
VASLEHLQKR IRGEVSSCGT QGRGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	256	263	RRSRRRKQ
2	258	263	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	4e-69	bZIP family protein