PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41237.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family M-type_MADS
Protein Properties Length: 141aa    MW: 15589.5 Da    PI: 10.7225
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF35.31.5e-111237227
                ---SHHHHHHHHHHHHHHHHHHHHHH CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeEL 27
                +i  ++ r vtfskRr+g++KKA+EL
  PHT41237.1 12 KITKETSRMVTFSKRRKGLFKKAKEL 37
                588899*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MGTGKKKIEI QKITKETSRM VTFSKRRKGL FKKAKELESM TEAFSGTNNN NSRSTEPSTS  60
GLNSRHSNSD DVAVASGDSS GSRSSSSSTP RRKGLHDWVE GIDVERCGNL NRLLMWKKQL  120
EGTRKKIASI EDSESFQALF G