PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41337.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 144aa    MW: 16312 Da    PI: 4.5895
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.41.9e-134503379
    trihelix 33 evskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79
                +vs+++r++g  r+p+qC+++w+n+  ++ kik++e++ +  s+s +
  PHT41337.1  4 SVSSYCRQHGADRGPVQCRKRWSNMISDFNKIKTWESQANGSSESYW 50
                89***********************************9865555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MGDSVSSYCR QHGADRGPVQ CRKRWSNMIS DFNKIKTWES QANGSSESYW IISNDLWREK  60
RLSETVEEEA EEEEEENDDV SHTGEYTMED DVLPPATEEV GSNPLKEGDV KYNKAKSIPS  120
PTPISGNLCI RGRILFKKGR VILA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.19e-25Trihelix family protein