PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41514.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 297aa    MW: 33465 Da    PI: 7.9598
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41514.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.13.8e-3270127260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  + vrYkeClkNhAa++Gg+a+DGCgEfmps geegt++al C+AC+CHRnFHR+e+e e
   PHT41514.1  70 KMVRYKECLKNHAAAMGGTATDGCGEFMPS-GEEGTIEALICSACNCHRNFHRKEMEGE 127
                  679**************************9.999*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MELPSQEEDM PIPINSTYVG GGHGHGHMIH HDPTPPPNNT NHIIPPSMNG PPIDAAPVAA  60
APDHHVPFKK MVRYKECLKN HAAAMGGTAT DGCGEFMPSG EEGTIEALIC SACNCHRNFH  120
RKEMEGEQQQ HLQLPSSCDC YHLNRGGGKK VYLGHNNHHH KALLGPEPFG TIIPTRPPPH  180
HQMIMSYNMG SLPNSESEEH DQDHAGIMAM ARPLHHHHHH HVKKRFRTKF TQEQKDKMLN  240
FAEKVGWKIQ KQEEAVVQQF CQEVGVKRRV LKVWMHNNKH SLAKKNSNNI IPHENQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.11e-72ZF-HD family protein