PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41539.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 501aa MW: 57478.2 Da PI: 6.9435

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.7	1.2e-20	55	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY e+Ak +GFs+r+++++ + + t+r fvC + g++ + +++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel PHT41539.1 55 EFYAEFAKGCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKAANDNKPQRNRKSSRCGCQAYMRISKTTelgVPEWRVTGFTNHHNHELL 148 6************9998877356667999************99******************99777789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MMEIYGDTSD QRSLSLDDTS STEESPDQTR LSLETTNEAV PYIGLRFHNH DAAYEFYAEF 60 AKGCGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPVKA ANDNKPQRNR KSSRCGCQAY 120 MRISKTTELG VPEWRVTGFT NHHNHELLEP NQQMLRLMEL EKGVEPGYLP FTEKDVRNLL 180 QSFRKVDPED ESIDLLRMCR NIKEKDPNFK YDFSLDSNNR LENIAWSYAS SIQSYDIFGD 240 AVVFDTTHRL TALDMPLGIW VGVNNYGMPC FFGCVLLREE TLRSYSWALK VFLAFMNGKA 300 PQTVLTDQNM CLKEAINLEM PTTKHALCIW LVVAKYPSWF NAVLGERYNE WKAEFNRLYN 360 LESVEDFELG WRDMVNSFGL HTNRHIASLF SLRSLWALPY LRSHFFAGMT TTSHSKSINA 420 FIQRFLSAQT RLAHFVEQVA VTVDFKDQTG EQQTMQQNLQ NICLKTGAPM EAHAATVLTP 480 FAFSKLQEQL VLAAHYASFQ V

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MMEIYGDTSD QRSLSLDDTS STEESPDQTR LSLETTNEAV PYIGLRFHNH DAAYEFYAEF  60
AKGCGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPVKA ANDNKPQRNR KSSRCGCQAY  120
MRISKTTELG VPEWRVTGFT NHHNHELLEP NQQMLRLMEL EKGVEPGYLP FTEKDVRNLL  180
QSFRKVDPED ESIDLLRMCR NIKEKDPNFK YDFSLDSNNR LENIAWSYAS SIQSYDIFGD  240
AVVFDTTHRL TALDMPLGIW VGVNNYGMPC FFGCVLLREE TLRSYSWALK VFLAFMNGKA  300
PQTVLTDQNM CLKEAINLEM PTTKHALCIW LVVAKYPSWF NAVLGERYNE WKAEFNRLYN  360
LESVEDFELG WRDMVNSFGL HTNRHIASLF SLRSLWALPY LRSHFFAGMT TTSHSKSINA  420
FIQRFLSAQT RLAHFVEQVA VTVDFKDQTG EQQTMQQNLQ NICLKTGAPM EAHAATVLTP  480
FAFSKLQEQL VLAAHYASFQ V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein