PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41627.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 487aa MW: 54316.1 Da PI: 6.6183

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.5	1.3e-28	233	293	1	59
---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kgs+ +pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ PHT41627.1 233 MNDGCQWRKYGQKIAKGSPnCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 293 58*************9736*****99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MENNNKSESD NEMEIDLRLK LDAREEENEE NKIGEPSQLT EKTQAKDQEI PKNDQELSML 60 EKEMKRMKEE NKVLRMAVEQ TMKDYYDLQA KFSTIHQNNH KDHKNFLSLS GNDDSTTSEG 120 LTTRVPKILD IINTTNRTSS PTSHEDDTMD GDQLGLSLTL VSSNSTTSSK LLEMLEEDQR 180 KEKKEDHPTI THQIQNNKSQ NLGGLTSHHV TTASPPNRKS RVSVRARCES ATMNDGCQWR 240 KYGQKIAKGS PNCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA 300 MASTAASFML VDSSISPLLN NPNSSLNQPL NFPNYHHNLA PNYHHNLAPY NLSMIRNNIL 360 NSSDPNSQGN IVLDLTKNIS NNHQFPFASS SSNSHEMGHS NWMPKLPNYE GNSLLAGPKL 420 QGEHHYSHNN NNNIPPTLAH DENMSAIAAD PKFRVAVAAA ISSLINKDQS HSTGESNGGS 480 INRHTDS

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MENNNKSESD NEMEIDLRLK LDAREEENEE NKIGEPSQLT EKTQAKDQEI PKNDQELSML  60
EKEMKRMKEE NKVLRMAVEQ TMKDYYDLQA KFSTIHQNNH KDHKNFLSLS GNDDSTTSEG  120
LTTRVPKILD IINTTNRTSS PTSHEDDTMD GDQLGLSLTL VSSNSTTSSK LLEMLEEDQR  180
KEKKEDHPTI THQIQNNKSQ NLGGLTSHHV TTASPPNRKS RVSVRARCES ATMNDGCQWR  240
KYGQKIAKGS PNCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA  300
MASTAASFML VDSSISPLLN NPNSSLNQPL NFPNYHHNLA PNYHHNLAPY NLSMIRNNIL  360
NSSDPNSQGN IVLDLTKNIS NNHQFPFASS SSNSHEMGHS NWMPKLPNYE GNSLLAGPKL  420
QGEHHYSHNN NNNIPPTLAH DENMSAIAAD PKFRVAVAAA ISSLINKDQS HSTGESNGGS  480
INRHTDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-58	WRKY family protein