PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT41656.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 195aa MW: 22353.7 Da PI: 4.4787

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT41656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	122.8	3e-38	8	127	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrF Ptdeelvv++L++kv+ +++ +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r + +r+t++gyWk+ g d++++s+ +++ PHT41656.1 8 LPPGFRFYPTDEELVVHFLHRKVALLPCHP-DVIPDLDLYPYDPWDLDGKAMAEGNKWYFYSRRTQ--------SRITENGYWKSLGVDEPIFSSsSDS 97 79***********************999.99**********977778899**9854........799************986777 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g+kk +fy g++p+g kt+Wvm+e++l PHT41656.1 98 NIGMKKYYAFYLGEKPEGAKTNWVMQEFSL 127 8*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MGDSNVNLPP GFRFYPTDEE LVVHFLHRKV ALLPCHPDVI PDLDLYPYDP WDLDGKAMAE 60 GNKWYFYSRR TQSRITENGY WKSLGVDEPI FSSSSDSNIG MKKYYAFYLG EKPEGAKTNW 120 VMQEFSLSDS SSASASSRSS SRRKNRSKID YSGWVICRVY ERNCDNDDDD NGTELSCLDE 180 VFLSLDDLDE ISLPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	2e-77	NAC family protein