PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT41667.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 354aa    MW: 39267.8 Da    PI: 6.7066
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT41667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.99.3e-165691134
        GATA  1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34
                C++Cg ++  Tp +Rrgp+g++tLCnaCGl+++ kg
  PHT41667.1 56 CHHCGISEsaTPAMRRGPSGPRTLCNACGLMWANKG 91
                ********9***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MLAEIDLTGT MVAKIAFRSG MHRKNGQFAS LKEKTAGDSI DSGDSTAHPE PTLRRCHHCG  60
ISESATPAMR RGPSGPRTLC NACGLMWANK GILRDTAKGG RHVPFDKSEP ETPDVKLSTV  120
APEDSYLKQQ QEGSSGETRP LTEENPSVTT AELVVIFEKV KYRTIGVITK LDIMDRGTDA  180
HNFLLGKVIP LRLGYVGIVN RNQEAVCKKD SFKYLESTIQ GNGEMDEDVS HRIGASWMKW  240
RLASGILCDK KDMQEAAGNF ADSCPPVGMG ISSVNIDEED NLDELANASG TEFEIPASFD  300
EQACPIFMQY VFICLRLWWR VAKWALIHIW VLTGLRPDIQ YSKLTQSRKI PIKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.31e-23GATA family protein