PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42007.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 248aa    MW: 27523.8 Da    PI: 5.647
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA25.12.5e-081037835
        GATA  8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35
                +T++ R+gp  ++ LCnaCGl++r + +
  PHT42007.1 10 ETSNRRNGPCEKPVLCNACGLRWRTRQT 37
                599999***66666**********9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MLGCKVLIQE TSNRRNGPCE KPVLCNACGL RWRTRQTLDG YIPKHANGEI QRSQLPSEMK  60
PARDDQKLEV EVEVSGQRGS SACLEEEMNN ISSIGSAGSA SDNCIQMEEI NGVSGWDKMS  120
DRNMRLHEMH NEIYALKGSM EVVANSVSKM GDIVDTKVVN ATEIKQLIVA VAAGHGQQQN  180
VPCDGQRNSH REAPIEVDEQ NSGAAKAGTT REGEYQLPTR SYHVEFPKFD GTGLKDWIYK  240
AEHFFDVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.23e-11GATA family protein