PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42032.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 301aa    MW: 33054.5 Da    PI: 7.2922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-20167216255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa+a+++a+ +++g
  PHT42032.1 167 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFNTAEDAARAYDRAAIEFRG 216
                 59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MTKNSNFSNM HWLNKRFKQD GTSSSLQNNQ QLQQQMPRRL TGDQEYSVMV SALKNVINGD  60
IPIDSNQGLN MFSPFQYSTG MNVASSPSTS MSTSFEQVLG VPAEQEPCQF CRIQGCLGCD  120
IFGTTFGSSS SSAAAAAAAA TTTMAPVADN KKKSASTSAI AKKKKKNYRG VRQRPWGKWA  180
AEIRDPRKAA RVWLGTFNTA EDAARAYDRA AIEFRGPRAK LNFSFADYTV ETPEQQSTSS  240
SSPQQLQEEP QQSLQQGNNN SDFGSEIWDQ LMGDNEIQDW LTMMNFNGDS SDSTGGNVHS  300
V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151166KKKSASTSAIAKKKKK
2161167AKKKKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.14e-30ERF family protein