PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42044.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 235aa    MW: 27062.7 Da    PI: 8.4026
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48e-16130219198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f+k +++s+v+   +l lp +f+++h  k   +  +tl de+g + e k+   k++    l++GW++F+ +++L +gD +vF+l+  ++f  +v ++r
  PHT42044.1 130 FVKPMLQSHVTGGFWLGLPVHFCKTHLPK--HDEYVTLIDENGDESETKYLALKTG----LSGGWRGFAIDHELVDGDALVFQLTAPTRF--KVYIIR 219
                 89************************433..3347***************666666....***********************9876666..888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVESKKKMLT YEESRLKRLE ENKKRMEELN LTKLAQAVRS ATSPKPSPMK KVKPRVRQEV  60
DLSSVRRSNR VADKPAPNYR EAVIEPLGRP RSYRRRDLLN RVYAADEDRQ YAIERAEQLQ  120
SEFDADFPSF VKPMLQSHVT GGFWLGLPVH FCKTHLPKHD EYVTLIDENG DESETKYLAL  180
KTGLSGGWRG FAIDHELVDG DALVFQLTAP TRFKVYIIRV NQAEDEETEG VDNVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-85B3 family protein