PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42047.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 246aa    MW: 28114.1 Da    PI: 7.3211
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67.3e-1635124198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f k +++s+v+   +l+lp+ f++ h+  ++ ++ +tl des  +++ k+  ++++    l++GW++F  a++L egD++vF+l +  e  l+v ++r
  PHT42047.1  35 FMKPMIRSNVSGGFWLSLPRLFCQLHM--PRHDIAVTLVDESQDEYKTKYLAERNG----LSGGWRGFSLAHDLVEGDVLVFQLFRFCE--LKVYIVR 124
                 89*********************9997..567899***************555555....9**********************865344..4777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MAMMHDLYDQ IDLATSAKYR AEEVLSRLST KHPSFMKPMI RSNVSGGFWL SLPRLFCQLH  60
MPRHDIAVTL VDESQDEYKT KYLAERNGLS GGWRGFSLAH DLVEGDVLVF QLFRFCELKV  120
YIVRANYLAE VDAALVLLRL YAHQKQVDPV HQRQDNRSTK QVGIKRQRLS SQAGDDYSAE  180
NMLHKHNMFE ELDLPSKGLA YETLSIVDAV KAGKLNDTPS GFSSWKMRPT EIEQLEIRPF  240
SGGYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-42B3 family protein