PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42068.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 445aa MW: 49944.9 Da PI: 6.5927

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.4	3e-09	250	297	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHT42068.1 250 SHSLAERVRREKISERMRFLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 297 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MNIALPEMLH NITSNGGNGS SELSVLDRQR ARMKWQQEQV HQQEMSYFSG QNDQLMNCFH 60 QSSEGQQFHG LINVNDQSLN ELVTRAIKPD PCLENNWRDF GTTGANGFGY VPIGVGHGGM 120 SHPAEMNYAI SRTTSCPPTM ADNAVSAVKP KETILSSNRG RESFKKRKAD KNQHLKEVAE 180 EETKDKKLKE CIEEGDSKVT TEKHSNKRST NNSNNSKENS DTSKEKSKIT EDKKPDYIHV 240 RARRGQATDS HSLAERVRRE KISERMRFLQ DLVPGCNKIT GKAGMLDEII NYVQSLQRQV 300 EFLSMKLAAV NPRLDIDVDN FFNKDIFATS TSNFPTVGAG TSSEMLSMAQ RQFNSLQQIV 360 SSSGLEMGIL NLSEMALRRT ASTRESMPEI FLDSSSINQV QSFPTWDTDL ENIYAMELQQ 420 GRSVQFLPHP STGFVEAGND LKMEM

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MNIALPEMLH NITSNGGNGS SELSVLDRQR ARMKWQQEQV HQQEMSYFSG QNDQLMNCFH  60
QSSEGQQFHG LINVNDQSLN ELVTRAIKPD PCLENNWRDF GTTGANGFGY VPIGVGHGGM  120
SHPAEMNYAI SRTTSCPPTM ADNAVSAVKP KETILSSNRG RESFKKRKAD KNQHLKEVAE  180
EETKDKKLKE CIEEGDSKVT TEKHSNKRST NNSNNSKENS DTSKEKSKIT EDKKPDYIHV  240
RARRGQATDS HSLAERVRRE KISERMRFLQ DLVPGCNKIT GKAGMLDEII NYVQSLQRQV  300
EFLSMKLAAV NPRLDIDVDN FFNKDIFATS TSNFPTVGAG TSSEMLSMAQ RQFNSLQQIV  360
SSSGLEMGIL NLSEMALRRT ASTRESMPEI FLDSSSINQV QSFPTWDTDL ENIYAMELQQ  420
GRSVQFLPHP STGFVEAGND LKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	1e-56	bHLH family protein