PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT42347.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 260aa MW: 30153.8 Da PI: 5.2652

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT42347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	79.9	5.4e-25	54	180	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kg 97 GfrFhPtdeel+ +yLk+ v + l+ ++ik +d+++ +ePw++ + +ee+ yf s+ ++ +++ k+ +r++ +g+Wk + + +++ ++ k+ PHT42347.1 54 EGFRFHPTDEELI-NYLKNFVLHGMLPPRDFIKLADLFEdLEPWEIM--AGSEEQTHYFLSRLKRFKNSTKKFSRTVGKGTWKGQNSCNPIEDNglkKN 149 6**********.9******999999998626*6..4455566677777788888889999**************9988777 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g k++L + + ++++ ++ +W+m+ey l PHT42347.1 150 TTIGYKRSLKYKSDNEKDENNDKWLMKEYFL 180 88******9999999********76 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MVHRILDGPS GHSSHVGQDE AILPERDGPS DGPPQPQWSI VKGSFCLGCD GPSEGFRFHP 60 TDEELINYLK NFVLHGMLPP RDFIKLADLF EDLEPWEIMA GSEEQTHYFL SRLKRFKNST 120 KKFSRTVGKG TWKGQNSCNP IEDNGLKKNT TIGYKRSLKY KSDNEKDENN DKWLMKEYFL 180 PDEYFRKSSK NYTFVICKIK EKKKNKGVIN EDVMEEEVDD EFIDYVLESI PDNHQLITND 240 DDNQFAVNYE VMRTSTLHKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	6e-18	NAC family protein