PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT42502.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 133aa    MW: 15614.8 Da    PI: 6.9192
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT42502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.53.1e-07197279128
         NAM  79 ksgyWkatgkdkevlsk...kgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                 ++g Wk++ + k+v+ +   ++ ++ +kk + +  ++++++     W+m+ey+l
  PHT42502.1  19 SKGSWKQKAEGKPVHYNsssSTVVIRCKKKMRYIiNNEHKEDDGHYWLMQEYEL 72 
                 58************99755555669********9544666667889******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MEYLVVLLMT VFIATSLQSK GSWKQKAEGK PVHYNSSSST VVIRCKKKMR YIINNEHKED  60
DGHYWLMQEY ELSNVILHKF DEKRRDYVLC AITKKLIETC SSEIYNVSEE TNDVNSSNDN  120
SMCWKLEQSK SEF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14450RCKKKMR