PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43064.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 370aa    MW: 40765.6 Da    PI: 4.8277
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.58.9e-202676155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++y+GVr ++ +gr++AeIrdp     + +r++lg+f+tae+Aa+a++ a+++l+g
  PHT43064.1 26 PRYRGVRKRP-WGRFAAEIRDPI----KkTRVWLGTFDTAEDAARAYDDAARALRG 76
                68********.**********72....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MRHRKSSELK RPGSDNLKQP ETDPPPRYRG VRKRPWGRFA AEIRDPIKKT RVWLGTFDTA  60
EDAARAYDDA ARALRGPKAK TNFNPLMLTT HEEDEDPPHP PTATGQFELF PRPACSSMSS  120
TLESSSGPRV GSGSGLTRMM KIPRPVYPPE DCRSDCDSSS SVVDDRCEVD HTSSFLNAKQ  180
PLPFDLNLPP PPSLDFDADD LHLACQQQSD SSCGDCSDIL SHDFQLAIFI IRLGSRASGY  240
PSLDGMLHSG IHQVWKSFQG KPLILQSEYD NEGLLLSQPP DVQGLDIPQQ GLPACFTDEI  300
PLTLRSAFAD SGPLSSDFSL LLPTWSISFE KGLNLTNSAG LDMYSSNSSC ESILDFRPAL  360
YCPVLSTFQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.14e-20ERF family protein