PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43168.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 199aa    MW: 22635.3 Da    PI: 8.5752
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS22.61.1e-071514598
        GRAS 45 fteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
                ++e+L +rla  vs++ykal+++e     s e +++ +l++e++P++kf++l a
  PHT43168.1  1 MLEGLVSRLAFLVSSIYKALRCKEPI---SGEIFSYIHLLYEICPYFKFGYLYA 51
                689**********************8...89999999**************987 PP
2GRAS131.59.2e-4153199136281
        GRAS 136 pegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvk 232
                 p+gpp++ iTg++++ s+  +   +e +g+rL+++ ++++vpfef + va +++++e+++L+v+pgE laVn++l lh+++desv+++++rd++L++vk
  PHT43168.1  53 PGGPPRIHITGIKDSISTyaRGGGIEIVGRRLSSVVASCNVPFEFYP-VAASCSNIEIKHLNVRPGEPLAVNFALVLHHMHDESVEIQNYRDRLLRMVK 150
                 799***********877788999************************.7999*********************************************** PP

        GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                 slsPk+v++veqe+++n+ +++ +fl++l+yy ++f+s+ + lpr+++e
  PHT43168.1 151 SLSPKIVTLVEQESNTNTVQLFPHFLKTLKYYPSVFESIYVALPRDHKE 199
                 *********************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MLEGLVSRLA FLVSSIYKAL RCKEPISGEI FSYIHLLYEI CPYFKFGYLY AWPGGPPRIH  60
ITGIKDSIST YARGGGIEIV GRRLSSVVAS CNVPFEFYPV AASCSNIEIK HLNVRPGEPL  120
AVNFALVLHH MHDESVEIQN YRDRLLRMVK SLSPKIVTLV EQESNTNTVQ LFPHFLKTLK  180
YYPSVFESIY VALPRDHKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.12e-84GRAS family protein