PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43478.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 211aa    MW: 22742.7 Da    PI: 8.823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.92e-212473255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++aa+++++g
  PHT43478.1 24 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAAREFRG 73
                6********.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MALKNKVSSN GSENAKVNGV KEVHYRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA  60
AKAYDAAARE FRGPKAKTNF PSPFPLETLN QSPSNSSTLE SSSGETGVHA PMEMDLTRRL  120
GAVAPVFHQQ PTVAVLPNGQ PVLLFDSLWR PGVVVDKSQL SYQVAPMAIE FTGAAGGVSS  180
VSDSSSVVEE NQYVGKKGLD LDLNLAPPME I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.19e-28ERF family protein