PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43498.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family SBP
Protein Properties Length: 182aa    MW: 20704.7 Da    PI: 10.1674
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.71.2e-4144118276
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                 Cq+e+C++dls+ak+yh+rhkvCe h+k++vv+v+gl+qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk+
  PHT43498.1  44 CQAEKCSVDLSDAKQYHKRHKVCENHAKSQVVVVAGLRQRFCQQCSRFHELTEFDESKRSCRRRLAGHNERRRKS 118
                 *************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
METTNNQLKS MEKNDDMLSI IEDAKKKNKK GSPNSSSSSL TRSCQAEKCS VDLSDAKQYH  60
KRHKVCENHA KSQVVVVAGL RQRFCQQCSR FHELTEFDES KRSCRRRLAG HNERRRKSIS  120
SSSSSADQSH NNNNNNNNNN TAEGSNRKGT VTMCGQVDER GRIHISIQDN NNNNSTYKNF  180
HR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.16e-40SBP family protein