PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43569.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 335aa    MW: 37720.1 Da    PI: 10.3157
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.11.3e-1433123186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  +++Liea   +  +l++g+l+ ++We+v++++     + ++  r+  qCk++++ l+k+yk +k+  ++   +  st+p+f++l+
  PHT43569.1  33 CWSEAATHTLIEAWGGKYVELNKGSLRHQHWEAVADAVnalhgHTKKQYRTEMQCKNRIDTLKKKYKIEKAKVSESPGRYFSTWPFFSSLN 123
                 7*************************************999987777889*********************99998888889******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MSDDKSPSPP PAALTVTPAV SARTAAFPAR EDCWSEAATH TLIEAWGGKY VELNKGSLRH  60
QHWEAVADAV NALHGHTKKQ YRTEMQCKNR IDTLKKKYKI EKAKVSESPG RYFSTWPFFS  120
SLNALLGVTV KASPPPPYTQ RRTPTQPVMP PLQWRAPPRP EMPPLQWRPP PPPDTSPLEW  180
RTPPQLPPPL LGVPVASRSK RPGATIDYTV SRRNFSAMAA AAAGSSDDSE EEEEVKEESE  240
TSSLAASAMA NAASKSKRKR NGGLVEGYKM LAEAVGKFSE TYERVEKAKQ RQMVELEKQR  300
MQFTKDLEIQ RMKLMMESQV HLEKLKRSNK QFRRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.14e-41Trihelix family protein