PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43651.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 427aa MW: 48721.9 Da PI: 5.2349

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.9	1.9e-34	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+ ++ ++sws+ng+sfvv+++ efa+++LpkyFkh+nf+SF+RQLn+YgF+kv+ e+ weF++++F +g+++ll++i PHT43651.1 15 FLSKTYELVDDAYTNPVVSWSHNGRSFVVWNPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRKVDPEQ---------WEFANEEFIRGQRHLLKNIY 102 9*************************************************************9998.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PHT43651.1 103 RRK 105 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MENSNGGSSS APAPFLSKTY ELVDDAYTNP VVSWSHNGRS FVVWNPPEFA RDLLPKYFKH 60 NNFSSFIRQL NTYGFRKVDP EQWEFANEEF IRGQRHLLKN IYRRKPIHSH SASGQSVPPL 120 TDTERQEYED EIERLKRENR LLQSSAENQE KFNQEYEIGI KSVEQRLQNV AHRQGKLISL 180 LTQLLQRPEF SSDLIQCNNS NSKKRRLLVS NYLTEEENAT TNSVVAPKLD LEMVKKLDSS 240 INFWEHFLYG IRMNPTEDQI CDFEHPQPLP PPIVIREMDT SSDDSGKRNS PITHSPSPSR 300 DIQSSPEFGG GPLSPVISSI YVNLECQLKP SDQTNLVINA TESQVEGNAT KASESVPNSG 360 NDVFWEQFLT ERPGCTEPQQ VENKDINGLT CDSRSVEDHR YWWNRGFNVE NLAERMGHLS 420 SPATTGS

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MENSNGGSSS APAPFLSKTY ELVDDAYTNP VVSWSHNGRS FVVWNPPEFA RDLLPKYFKH  60
NNFSSFIRQL NTYGFRKVDP EQWEFANEEF IRGQRHLLKN IYRRKPIHSH SASGQSVPPL  120
TDTERQEYED EIERLKRENR LLQSSAENQE KFNQEYEIGI KSVEQRLQNV AHRQGKLISL  180
LTQLLQRPEF SSDLIQCNNS NSKKRRLLVS NYLTEEENAT TNSVVAPKLD LEMVKKLDSS  240
INFWEHFLYG IRMNPTEDQI CDFEHPQPLP PPIVIREMDT SSDDSGKRNS PITHSPSPSR  300
DIQSSPEFGG GPLSPVISSI YVNLECQLKP SDQTNLVINA TESQVEGNAT KASESVPNSG  360
NDVFWEQFLT ERPGCTEPQQ VENKDINGLT CDSRSVEDHR YWWNRGFNVE NLAERMGHLS  420
SPATTGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	9e-81	HSF family protein