PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43739.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family DBB
Protein Properties Length: 297aa    MW: 31980.7 Da    PI: 4.767
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box17.68.2e-06447542
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                 C+ +e  e++  C  ++  lC +C ++ H        H++vpl
  PHT43739.1  4 QCNVCEVAEANVLCCADEAALCWSCDEKVHAAnklaskHQRVPL 47
                7*****999*********************66899999999986 PP
2zf-B_box28.43.5e-095390237
    zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..H 37
                ++++C+ ++e    +fC +++ llC++C  ++H    H
  PHT43739.1 53 SMPMCDICQETVGYFFCLEDRALLCRKCDIAIHTAnpH 90
                689********9*********************55674 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MKIQCNVCEV AEANVLCCAD EAALCWSCDE KVHAANKLAS KHQRVPLSAS SSSMPMCDIC  60
QETVGYFFCL EDRALLCRKC DIAIHTANPH VAVHQRFLLT GVKVGLEPVD PGGASSAGTS  120
QSIQKVSEPE SASLSKRNAP VSLDAQINKV LPPQASGVGD FAPTKSPFSG GSEAGSMPQW  180
QFDEFIGLND FNHNYGYMDN GTSKADNGKL GESDSSSLLR VDDEELDGDE CLGQVPDTSW  240
AVPQVPSPPT ASGLYWPKTY QNPFDCAVFV PDISYSPSSN FQQQPPSGAR LKRRRQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.17e-97DBB family protein