PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43743.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 259aa    MW: 29646.2 Da    PI: 10.0094
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-1097144554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    +Er+RR+++ + +++Lr l+P+       +K s ++ Le+ v+Y+k+L
  PHT43743.1  97 RRDVERQRRRDMAKLYQRLRLLIPSkY---LMGKRSISDHLEQIVDYVKDL 144
                 5689*********************77...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDDSEFDFGQ LDQLFNFLSS SLSPPSPPTT LQNQDSSIIL QTQNSNHVPK KKPIVTNHHH  60
QVMKKKPIKI TNINNDDQVQ NPRKEKEMIA EKKKVLRRDV ERQRRRDMAK LYQRLRLLIP  120
SKYLMGKRSI SDHLEQIVDY VKDLRKGIED LERKREALKQ LKSTICSSQL APSSSSMNLN  180
DDNEDRIIVK SCNEGVEICI KGELSLSKVL KVVMKEGFIV SSCVSSTVDQ SLFHIIQSKM  240
NTRGDIDLAV LRSKLMSLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-20bHLH family protein