PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT43744.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 265aa MW: 30167.5 Da PI: 9.3768

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT43744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.1	4.2e-10	99	145	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++ + ++ Lr l+P+ +K s ++ Le+ v+Y+k+L PHT43744.1 99 RDVERQRRRDMAKLYQSLRLLIPSkY---LMGKRSISDHLEQIVDYVKDL 145 679*******************77...9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MDDSEFDFGQ LDQLFNFLSS LPPPTPPPTT FQNQDSSISL QTQNSNHVPK KKPIVTNHHH 60 HHVIKKKPIK ISNINNDDQV QNPPKEKEKI AEKKKVIRRD VERQRRRDMA KLYQSLRLLI 120 PSKYLMGKRS ISDHLEQIVD YVKDLRKDIE DLERKRETLK QLKSTICSSQ LAPSSSSMNL 180 NELLNDDDDD DRINVKSCNE GVEISIKGGL SLSKVLKVLM KEGFIVSSCV SSTVNQELIH 240 IIQTKVNTSG DTDLATLRSK LMSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25400.1	9e-15	bHLH family protein