PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43814.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family SBP
Protein Properties Length: 134aa    MW: 15608.7 Da    PI: 5.3456
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP80.91.8e-2569125258
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDee 58 
                 Cqve+C +dl  ak+y++rhkvC+ h+kap vl++gl+qrfCqqCsr ++ ++ D++
  PHT43814.1  69 CQVEKCGVDLDGAKKYYKRHKVCQLHAKAPIVLLAGLRQRFCQQCSRLYNQDNLDDD 125
                 **************************************************9999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MATQIYGRPL KNMAAPMDFV EEDHEFEEED EEEDETVLIE KSGYLKRKKL NLDKKKGEKS  60
DGMQVKQYCQ VEKCGVDLDG AKKYYKRHKV CQLHAKAPIV LLAGLRQRFC QQCSRLYNQD  120
NLDDDDLTLN AFDK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14686KRKKLNLDKKKGEKSDGMQVKQYCQVEKCGVDLDGAKKYYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.16e-21SBP family protein