PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43824.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 213aa    MW: 23482.1 Da    PI: 9.297
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.92.7e-12127102128
         NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                 +kktLvfy+grapkgek++Wvmheyrl
  PHT43824.1   1 MKKTLVFYRGRAPKGEKSNWVMHEYRL 27 
                 8************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MKKTLVFYRG RAPKGEKSNW VMHEYRLDGK FAYHYISRSS KDEWVISRVF QKSATATTGT  60
ATSNGGKKRP SSSINNMYQE VSSPSSVSHL PPLLDSSPYS TTATSSSVVI GARDHSFKKE  120
HVSCFSTTAT NSATIDPHSV FDISNTLHAL PFTHYGRNST FPSLTSLHEN LQLPLFSGGA  180
SAMHGGFSNS IGNWSVPETQ KVEQSELDCM WTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.11e-28NAC family protein