PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43887.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 231aa    MW: 26983.5 Da    PI: 3.8412
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57341.34.3e-131382221297
      DUF573  12 eivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 ++++L+ ++dfk + g sp+   +d +y+++    ++++s+++l eKi   K+ f+k +k   +g++ +++++ dq+ f+l+++iWg
  PHT43887.1 138 DVAILRSILDFKCHYGYSPHPpSLDLIYHIMTAVPHLEISREELREKIIAYKENFNKVRKL--EGDNLQMDRPIDQEFFDLCMRIWG 222
                 589*****************999************************************99..***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MLESTSPPRS ASTKPCRITS PLPKQSEXNV IHQNSEQNGS GNQESEGDEG DEDTENDDNQ  60
EENDDQEEDE EEYELVIEED DNEEEEEEEE EEEEEEEVED EEERRRRRAA EKGKQQVSEQ  120
GGLSVTEYYV DYDADPLDVA ILRSILDFKC HYGYSPHPPS LDLIYHIMTA VPHLEISREE  180
LREKIIAYKE NFNKVRKLEG DNLQMDRPID QEFFDLCMRI WGNQDDDDGL R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-06GeBP family protein