PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43892.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 364aa    MW: 40942.2 Da    PI: 8.9762
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.5e-1079126454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RRdr+N++f eL  ll      + +K +K++iL  Av+ + +L
  PHT43892.1  79 SKACREKLRRDRLNDKFMELGALLEAG---RPPKTDKSAILVDAVRMVTQL 126
                 5678**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MVSPENTTNW LYDYGFEDSS VPDSNFSASA SGFNWPLQNL NGSTNVRSEI DGSIGESDYP  60
KESGSKKRAR VESCAPTSSK ACREKLRRDR LNDKFMELGA LLEAGRPPKT DKSAILVDAV  120
RMVTQLRDEA QKLKDSNLNL QEKIKELKAS ITSLAVEKTE LRDEKQRLKA EKEKLEQQLK  180
TTPAQPSFLP PGIPSAFAAH GQLPGSKLVP IMSYPGVAMW QFMPPAAVDT SQDHFKESDD  240
HNETTVQQES DTKVQQVLNV MPHYTISDIS SLWNVLPNSA IHRNYDGRAR VGQRASSLKI  300
EKKKKCPRCS RWCKYYDTRS SSIVMCTSCG KKFDPKEDSS FSGRKFDLHR KKQDRQTLLL  360
EGET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-85bHLH family protein