PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43982.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 206aa    MW: 23248.6 Da    PI: 6.1576
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB69.46.3e-221761792
       NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92
                m+k+lP +a i +da e +q+ +s fi  +t +a++ c+ +krk ++++d++wa+ ++G+++y e l+ yl+ky +
  PHT43982.1  1 MHKTLPMHATINDDAVEAIQKIMSYFIHRITIKANEYCHMDKRKIVTAEDIIWAMNNVGLHNYGELLTHYLHKYCQ 76
                89************************************************************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MHKTLPMHAT INDDAVEAIQ KIMSYFIHRI TIKANEYCHM DKRKIVTAED IIWAMNNVGL  60
HNYGELLTHY LHKYCQENSM HYLRPNIMQP NAPSSLILPI NSVPMMNYGY PHFPPNALLN  120
DPVAAVMTNV RENSMHYLRS AIVPPSTPSS LILPINSVPM MSYVYAQFSP NVLLNDSVAA  180
VMTNVRNENM VAENDEDPDS SESSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.23e-22NF-YB family protein