PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43983.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 149aa    MW: 17198.1 Da    PI: 8.2428
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB70.52.9e-221761792
       NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92
                m+k+lP +a i +da e +q+ +s fi  +t +a++ c+ +krk ++++d++wa+ ++G+++y e l+ yl+ky +
  PHT43983.1  1 MHKTLPMHATINDDAVEAIQKIMSYFIHRITIKANEYCHMDKRKIVTAEDIIWAMNNVGLHNYGELLTHYLHKYCQ 76
                89************************************************************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MHKTLPMHAT INDDAVEAIQ KIMSYFIHRI TIKANEYCHM DKRKIVTAED IIWAMNNVGL  60
HNYGELLTHY LHKYCQENSM HYLRPNIMQS NAPSSLILPI NSVPMMSYGY PHFPPNVLLN  120
DPVAVVMTNV RVETNMQYTT IGQLKVVRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.21e-22NF-YB family protein