PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT43985.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 123aa    MW: 14096 Da    PI: 4.5516
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT43985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB30.77.5e-1013485192
       NF-YB 51 sdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92
                ++ c+      ++++d+lwa+ ++G+++yve l+ yl+kyr 
  PHT43985.1 13 NEYCH------MTAKDILWAMNNVGLNNYVEFLTDYLQKYRR 48
                44444......6899*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MSYFIQRITI KGNEYCHMTA KDILWAMNNV GLNNYVEFLT DYLQKYRREN SMHYLRPTIV  60
PPSTPSSLIL PINSVPMMSY VYAQFSPNML LNDSVPAVMT NVRNENMVAE NDEDPDSSES  120
SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.22e-09NF-YB family protein